03 بهمن 1403
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مرکز تحقیقات فناوریهای بیومدیکال و رباتیک

دانشگاه علوم پزشکی تهران

 

2023:

- Amin Amiri Tehrani Zade, Maryam Jalili Aziz, Hossein Majedi, Alireza Mirbagheri, Alireza Ahmadian, “Spatiotemporal analysis of speckle dynamics to track invisible needle in ultrasound sequences using convolutional neural networks: a phantom study“, International Journal of Computer Assisted Radiology and Surgery, 2023

- Amirhossein Fathi, Saereh Hosseindoost, Seyed Hassan Inanloo, Ebrahim Espahbodi, Alireza Ahmadian, Seyed Ali Emami, Nader Ali Nazemian Yazdi, Mehdi Sanatkar, Hossein Majedi, "Needle Navigation; a New Era in the Interventional Pain Practice: A Narrative Review", Journal of Anesthesia & Pain Medicine, 2023.

Wenbin Wu, Wei Xia, Zhong Jun, Samaneh Saghatchi, Saeedeh Navaei Lavasani, Saeed Mohagheghi, Alireza Ahmadian, Xin Gao,"Coordinate-based fast lightweight path search algorithm for electromagnetic navigation bronchoscopy" Medical & Biological Engineering & Computing,2023.

 


 

2022:

- Wenbin Wu, Wei Xia, Zhong Jun, Samaneh Saghatchi, Saeedeh Navaei Lavasani, Saeed Mohagheghi, Alireza Ahmadian, Xin Gao, “Coordinate-based fast lightweight path search algorithm for electromagnetic navigation bronchoscopy“, Medical & Biological Engineering & Computing, 2022

- Amin Amiri Tehrani Zade, Maryam Jalili Aziz, Saeed Masoudnia, Alireza Mirbagheri, Alireza Ahmadian, “An improved capsule network for glioma segmentation on MRI images: A curriculum learning approach“, Computers in Biology and Medicine, 2022

- Amin Amiri Tehrani Zade, Maryam Jalili Aziz, Hossein Majedi, Alireza Mirbagheri, Alireza Ahmadian, “Spatiotemporal analysis of speckle dynamics to track invisible needle in ultrasound sequences using Convolutional Neural Networks“, europepmc.org, 2022

- Parastoo Farnia, Bahador Makkiabadi, Maysam Alimohamadi, Ebrahim Najafzadeh, Maryam Basij, Yan Yan, Mohammad Mehrmohammadi, Alireza Ahmadian, “Photoacoustic-MR Image Registration Based on a Co-Sparse Analysis Model to Compensate for Brain Shift“, Sensors, 2022

- Tahereh Mahmoudi, Zahra Mousavi Kouzahkanan, Amir Reza Radmard, Raheleh Kafieh, Aneseh Salehnia, Amir H Davarpanah, Hossein Arabalibeik, and Alireza Ahmadian, “Segmentation of Pancreatic Ductal Adenocarcinoma (PDAC) and surrounding vessels in CT images using deep convolutional neural networks and texture descriptors“, Scientific Reports, 2022

- Tahereh Mahmoudi, Amir Reza Radmard, Aneseh Salehnia, Alireza Ahmadian, Amir H Davarpanah, Raheleh Kafieh, and Hossein Arabalibeik, “Differentiation between pancreatic ductal adenocarcinoma and normal pancreatic tissue for treatment response assessment using multi-scale texture analysis of CT images“, Journal of Biomedical Physics and Engineering, 2022

- M Rahmani, H Moghadassi, P Farnia, and A Ahmadian, “D2BGAN: Dual Discriminator Bayesian Generative Adversarial Network for Deformable MR-Ultrasound Registration Applied to Brain Shift compensation“, Cold Spring Harbor Laboratory, 2022

 


 

2021:

- Ebrahim Najafzadeh, Parastoo Farnia, and Alireza Ahmadian, “Image-Guided Surgery and Its Future with the Artificial Intelligence“,Frontiers in Biomedical Technologies, 2021

- Saeed Alikhani, Mohammad Jalal Sadeghi, Alireza Ahmadian, Farzam Farahmand, and Saeed Sarkar, “Location tracking on a surface“, US Patent, 2021

- Saeedeh Navaei Lavasani, Parastoo Farnia, Ebrahim Najafzadeh, Samaneh Saghatchi, Mehdi Samavati, Hamidreza Abtahi, Mohammadreza Deevband, and Alireza Ahmadian, “Bronchoscope motion tracking using centerline-guided Gaussian mixture model in navigated bronchoscopy“, Physics in Medicine & Biology, 2021

- Pezhman Pasyar, Tahereh Mahmoudi, Seyedeh-Zahra Mousavi Kouzehkanan, Alireza Ahmadian, Hossein Arabalibeik, Nahid Soltanian, and Amir Reza Radmard, “Hybrid classification of diffuse liver diseases in ultrasound images using deep convolutional neural networks“, Informatics in Medicine Unlocked, 2021

 


 

2020:

- P Farnia, E Najafzadeh, S Saghatchi, M Samavati, H Abtahi, MR Deevband, and A Ahmadian, “Bronchoscope motion tracking using centerline-guided gaussian mixture model in navigated bronchoscopy“, Physics in Medicine and Biology, 2020

- Ebrahim Najafzadeh, Parastoo Farnia, Saeedeh N Lavasani, Maryam Basij, Yan Yan, Hossein Ghadiri, Alireza Ahmadian, and Mohammad Mehrmohammadi, “Photoacoustic image improvement based on a combination of sparse coding and filtering“, Journal of biomedical optics, 2020

- Ebrahim Najafzadeh, Parastoo Farnia, Alireza Ahmadian, and Hossein Ghadiri, “Light-Emitting Diode Based Photoacoustic Imaging System“, Frontiers in Biomedical Technologies, 2020

- Seyed Mohammad Reza Noori, Parastoo Farnia, Mohammad Bayat, Naghmeh Bahrami, Ali Shakourirad, and Alireza Ahmadian, “Automatic detection of symmetry plane for computer-aided surgical simulation in craniomaxillofacial surgery“, Physical and Engineering Sciences in Medicine, 2020

- Fatemeh Salehihafshejani, Alireza Ahmadian, Afshin Shoeibi, Roohallah Alizadehsani, Habibollah Dashti, Niloofar Ayoobi Yazdi, Abbas Khosravi, and Saeid Nahavandi, “Development of novel algorithm to visualize blood vessels on 3D ultrasound images during liver surgery“, arXiv preprint arXiv:2008.08280, 2020

- Jalil Jalili, Sedigheh M Hejazi, Mohammad Riazi-Esfahani, Arash Eliasi, Mohsen Ebrahimi, Mojtaba Seydi, Masoud Aghsaei Fard, and Alireza Ahmadian, “Retinal image mosaicking using scale-invariant feature transformation feature descriptors and Voronoi diagram (Erratum)“, Journal of Medical Imaging, 2020

- Jalil Jalili, Sedigheh M Hejazi, Mohammad Riazi-Esfahani, Arash Eliasi, Mohsen Ebrahimi, Mojtaba Seydi, Masoud Aghsaei Fard, and Alireza Ahmadian, “Retinal image mosaicking using scale-invariant feature transformation feature descriptors and Voronoi diagram” , Journal of Medical Imaging, 2020

- Parastoo Farnia, Mohammad Mohammadi, Ebrahim Najafzadeh, Maysam Alimohamadi, Bahador MakkiAbadi, and Alireza Ahmadian, “High-quality photoacoustic image reconstruction based on deep convolutional neural network: towards intra-operative photoacoustic imaging“, Biomedical Physics & Engineering Express, 2020

- E Najafzadeh, H Ghadiri, Meysam Alimohamadi, Parastoo Farnia, M Mehrmohammadi, and Alireza Ahmadian, “Evaluation of multi-wavelengths LED-based photoacoustic imaging for maximum safe resection of glioma: a proof of concept study“, International Journal of Computer Assisted Radiology and Surgery, 2020

- Samaneh Alimohamadi Gilakjan, Hossein Majedi, Bahador Makki Abadi, and Alireza Ahmadian “Spinal pain relief procedures with the assistance of the MRI‐updated statistical shape model“, The International Journal of Medical Robotics and Computer Assisted Surgery, 2020

- Parastoo Farnia, Ebrahim Najafzadeh, Ali Hariri, Saeedeh Navaei Lavasani, Bahador Makkiabadi, Alireza Ahmadian, and Jesse V. Jokerst, “A Dictionary Learning Technique Enhances Signal in LED-based Photoacoustic Imaging”Biomedical Optics Express, 2020

 

 


 

2019:

- Ebrahim Najafzadeh, Hossein Ghadiri, Maysam Alimohamadi, Parastoo Farnia, Mohammad Mehrmohammadi, Alireza Ahmadian, Application of multi-wavelength technique for photoacoustic imaging to delineate tumor margins during maximum-safe resection of glioma: A preliminary simulation study, Journal of Clinical Neuroscience, 2019

- S Navaei Lavasani, M Deevband, P Farnia, A Ahmadian, S Saghatchi, “Compensation of Dynamic Electromagnetic Field Distortion Using Simultaneous Localization and Mapping Method with Application in Endobronchial Ultrasound‐Transbronchial Needle”, The International Journal of Medical Robotics and Computer Assisted Surgery, 2019

- Samira Arabpou, Ebrahim Najafzadeh, Parastoo Farnia, Alireza Ahmadian, Hossein Ghadiri, Mohammad Sadegh Ahmad Akhoundi, Detection of Early Stages Dental Caries Using Photoacoustic Signals: The Simulation Study, Frontiers in Biomedical Technologies, 2019

- Samaneh Alimohamadi Gilakjan, Javad Hasani Bidgoli, Reza Aghaizadeh Zorofi & Alireza Ahmadian,Artificially enriching the training dataset of statistical shape models via constrained cage-based deformation, Australasian physical & engineering sciences in medicine, 2019

 - Mehdi Samavati, Alireza Ahmadian, Hamidreza Abtahi, Amirhossein Golnabi, Asl Reza Arjmandi, “A Hybrid ethod for Real-Time Bronchoscope Tracking Using Contour Registration and Synchronous EMT Data (PHYSICS)”, IRANIAN JOURNAL OF RADIOLOGY, 2019

 


 

2017:

 - Peyman Ghobadi Azbari, Mostafa Abdolghaffar, Saeed Mohaqeqi, Mohammad Pooyan, Alireza Ahmadian, Niloofar Ghanbarzadeh Gashti ,A novel approach to the extraction of fetal electrocardiogram based on empirical mode decomposition and correlation analysisAustralasian physical & engineering sciences in medicine, 2017

- P Dezfouli, M Ali, M Parto Dezfouli, A Ahmadian,et al.”Quantification of 1H–MRS signals based on sparse metabolite profiles in the time‐frequency domain Journal of NMR in Biomedicine,2017

 - PG AZBARI, A Ahmadian, et al.A hybrid tracking system for image-guided spine surgery using a tracked mobile C-arm: a phantom study”, Turkish Journal of Electrical Engineering & Computer Sciences 25 (1), 434-448, 2017


 

2016:

- Amrollah Mohammadi, A. Ahmadian, et. al. A combined registration and finite element analysis method for fast estimation of intraoperative brain shift; phantom and animal model study”Int J Med Robotics Computer Assisted Surger 2016, John Wiley & Sons

- ND Serej, A Ahmadian, et al. A robust keypoint extraction and matching algorithm based on wavelet transform and information theory for point-based registration in endoscopic sinus cavity data , Journal of Signal, Image and Video Processing 10 (5), 983-991, 2016


 

2015:

- A Mohammadi, A Ahmadian, et al. Estimation of intraoperative brain shift by combination of stereovision and doppler ultrasound: phantom and animal model study, International journal of computer assisted radiology and surgery, 2015

- J Hasani-Bidgoli, SM SadrHosseini, A Safavi-Naeini, H Saberi, A Ahmadian , “Experimental Evaluation of PARSISS Image Guided Surgery System , Journal of Frontiers in Biomedical Technologies, 2015

- Farnia, A. Ahmadian, T. Shabanian, N. D. Serej, J. Alirezaie, “Brain shift compensation by non-rigid registration of intra-operative ultrasound images with preoperative MR images based on residual complexity”, International Journal of Computer Assisted Radiology and Surgery, 2015

- Ershad, A. Ahmadian, H. Saberi, “Preoperative CT and Intra-Operative Physical Space Registration of the Spine using an Articulated Model: a phantom study”, Journal of Frontiers in Biomedical Technologies, accepted, 2015

- Farnia, A. Ahmadian, N. Dadashi, “Performance Evaluation of the Modified Iterative Closest Point Methods for Intra-operative Ultrasound and pre-operative MR Image Registration of Brain  Journal of Frontiers in Biomedical Technologies, 2015

- Dadashi, A. Ahmadian, S. Mohagheghi, S. M. SaderHose, “A Projected Landmark Method for Reduction of Registration Error in Image Guided Surgery Systems“, International Journal of Computer Assisted Radiology and Surgery, JCARS, accepted, May 2015


 

2014:

- Ahmadian,A. Fathi, S. Mohagheghi, K. Amini, M. Sadr, “A Region-Based Anatomical Landmark Configuration for Sinus Surgery Using Image Guided Navigation System: A Phantom-Study“, Journal of Cranio-Maxillo-Facial Surgery, 2014

 - Mohagheghi, A. Ahmadian, “Accuracy assessment of a maker-free Method for Registration of CT and Stereo Images applied in Image Guided Implantology: a phantom study  “, Journal of Cranio-Maxillo-Facial Surgery, 2014

- Mohammad Reza Ay, Afshin Akbarzadeh, Alireza Ahmadian, Habib Zaidi, Classification of bones from MR images in torso PET-MR imaging using a statistical shape model”, Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, Volume 734, Part B, 11 January 2014

 - Elaheh Kia , Anahita Fathi Kazerooni , Alireza Ahmadian et al, “Improved Quantification of Dynamic Contrast Enhanced MR Imaging (DCE-MRI) in Adnexal Masses by Elastic Registration Method”,  Iranian Journal of Radiology 11(S1) March 2014

- Fatemeh Nazema, Alireza Ahmadian, Nasim DadashiSeraj, Masoumeh Giti, “Two-stage point-based registration method between ultrasound and CT imaging of the liver based on ICP and Unscented Kalman Filter: A phantom study“, Int J CARS, 9:39–48, 2014

 - Marzieh Ershad, Alireza Ahmadian, Nassim Dadashi Seraj, Hooshang Saberi, Keyvan Amini Khoiy, “Improving target registration error in vertebra during image-guided spine surgery“, Int J CARS, 9:29–38, 2014


 

2013:

- Afshin Akbarzadeh, Daniel GutierrezAylin Baskin, Mohammad Reza Ay, Alireza Ahmadian et al, “Evaluation of whole-body MR to CT deformable image registration”, Journal of Applied Clinical Medical Physics 14(4):4163July 2013

- Ahmadian, N. dadashi, S. karimifard, P. farnia, “An Efficient Method for Estimation of Soft Tissue Deformation Based on Intra-Operative Stereo Image Features and Point-Based Registration“International journal of imaging systems and technology, IJIMS, Vol. 23, 294-303, August 2013

- Hossein Yousefi, Alireza Ahmadian, Davood Khodadad, Hooshangh Saberi, Alireza Daneshmehr, “An Optimised Linear Mechanical Model for Estimating Brain Shift Caused by Meningioma Tumours“International Journal of Biomedical Science and Engineering, IJBSE, Vol. 1, No. 1, June 2013

- Marzieh Ershad, Alireza Ahmadian , et al., “Minimization of target registration error for vertebra in image-guided spine surgery”, Interational Journal of Computer Assisted Radiology and Surgery, july 2013

- Ahmadian, A. Hashemi, M. Baboli, “An Efficient Algorithm for Remote Detection of Simulated Heart Rate Using Ultra-Wide Band Signal “,American Journal of Biomedical Engineering, 3(6):199-207, 2013

- Mirbagheri, M. A. Baniasad, F. Farahmand, S. Behzadipour, A. Ahmadian, “Medical Robotics: State-of-the-Art Applications and Research Challenges”. International Journal of Healthcare Information Systems and Informatics. 2013;8(2):1-14

- Abolfazl Zanghaei, Mohammadjavad Abolhassani, Alireza Ahmadian, Mohammad Reza Ay, and Houshang Saberi, “A New Method to Enhance the Clustering Algorithm”, International Journal of Computer and Electrical Engineering, Vol. 5, No. 1, 171-175 , February 2013

- Khodadad , A. Ahmadian, H. Y. Banaem, M. Ay, A. F. Esfahani, “CT and PET Image Registration: Application to thorax area“Journal of Image and graphic, 2013 

- Fereshteh Yousefi Rizi, Alireza Ahmadian, Nader Rezaie, Seyed Amir Iranmanesh, “Leakage Suppression in Human Airway Tree segmentation Using Shape Optimization based on Fuzzy Connectivity Method” International Journal of Imaging Systems and Technology, 2013


 

2012:

- Ebrahim Najafzadeh, Marjaneh Hejazi, Alireza Ahmadian, Hanieh Mohamadreza , “Spectral Separation of Quantum Dots within Tissue Equivalent Phantom Using Linear Unmixing Methods in Multispectral Fluorescence Reflectance Imaging”, Iranian Journal of Medical Physics, 177-182, 2012

- Afshin Akbarzadeh ,Mohammad Reza Ay , Alireza Ahmadian  and H Zaidi, “MRI-guided attenuation correction in whole-body PET/MR: Assessment of the effect of bone attenuation”, Annals of Nuclear Medicine 27(2) December 2012

- Azadeh Sharafi, Mehran Baboli, Mohammad Eshghi, Alireza Ahmadian, “Respiration-rate estimation of a moving target using impulse-based ultra wideband radars”, Australas Phys Eng Sci Med , 35:31–39, 2012

 

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